BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008G02SP1|AL425914
(795 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig693 1004 0.0
>3x_Contig693
Length = 3563
Score = 1004 bits (503), Expect = 0.0
Identities = 514/523 (98%)
Strand = Plus / Plus
Query: 273 aattagaagggtgtgtatctcatcaattgatggaagtatccgctgatagaatcaattaga 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aattagaagggtgtgtatctcatcaattgatggaagtatccgctgatagaatcaattaga 60
Query: 333 tatatatatatmtmtmcmtgtmcgtgtgtacaaggttttttattttaatgtactttctga 392
||||||||||| | | | ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatatatatatatatacatgtacgtgtgtacaaggttttttattttaatgtactttctga 120
Query: 393 ttggaaaacttattaatatgtggtatacyatgtgtgttgtatttaggtttcctcaaaacc 452
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 121 ttggaaaacttattaatatgtggtatactatgtgtgttgtatttaggtttcctcaaaacc 180
Query: 453 tcaggcaataggagtagattggtggtttgtatcattatttgtatgtagcgttaatggttt 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcaggcaataggagtagattggtggtttgtatcattatttgtatgtagcgttaatggttt 240
Query: 513 ttgtaagagatggcccattctttcgatttttgttctcaaatagccttctatttcctttga 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgtaagagatggcccattctttcgatttttgttctcaaatagccttctatttcctttga 300
Query: 573 atggmtcccatccttatggttaccagaccacgacaagggtaccattggaacacgctcgac 632
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atggatcccatccttatggttaccagaccacgacaagggtaccattggaacacgctcgac 360
Query: 633 gcaatgtagatatggcgcctgtyccacttgtgctactttatccgggttgttcgtaagtca 692
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 361 gcaatgtagatatggcgcctgttccacttgtgctactttatccgggttgttcgtaagtaa 420
Query: 693 tctgacgtttgagatccccaaatcgattagtattgccctacctatggagaaatcccgacc 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tctgacgtttgagatccccaaatcgattagtattgccctacctatggagaaatcccgacc 480
Query: 753 atctgctggatgttttaacagcaagttggcctgcactgtgtct 795
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atctgctggatgttttaacagcaagttggcctgcactgtgtct 523
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8348
Number of Sequences: 1807
Number of extensions: 8348
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 795
length of database: 10,358,551
effective HSP length: 16
effective length of query: 779
effective length of database: 10,329,639
effective search space: 8046788781
effective search space used: 8046788781
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)